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Class HardyWeinbergCalculation


  • public final class HardyWeinbergCalculation
    extends java.lang.Object
    This class calculates a HardyWeinberg p-value given three values representing the observed frequences of homozygous and heterozygous genotypes in the test population.
    • Method Summary

      All Methods Static Methods Concrete Methods 
      Modifier and Type Method Description
      static double hwCalculate​(int obsAA, int obsAB, int obsBB)
      Calculates exact two-sided hardy-weinberg p-value.
      • Methods inherited from class java.lang.Object

        equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Method Detail

      • hwCalculate

        public static double hwCalculate​(int obsAA,
                                         int obsAB,
                                         int obsBB)
        Calculates exact two-sided hardy-weinberg p-value. Parameters are number of genotypes, number of rare alleles observed and number of heterozygotes observed. (c) 2003 Jan Wigginton, Goncalo Abecasis (goncalo@umich.edu)