Package VCF.Filters

Interface VCFFilter

    • Method Summary

      All Methods Instance Methods Abstract Methods 
      Modifier and Type Method Description
      void change​(VCF vcf)
      Apply this filter to a VCF
      org.apache.commons.configuration2.tree.ImmutableNode getConfig()
      Get the config for this filter
      java.lang.String getSummary()
      Gets a string summary of this filter
    • Method Detail

      • change

        void change​(VCF vcf)
             throws VCFDataException
        Apply this filter to a VCF
        Parameters:
        vcf - The VCF
        Throws:
        VCFDataException - If there is a problem with the data in the VCF
      • getSummary

        java.lang.String getSummary()
        Gets a string summary of this filter
        Returns:
        The string
      • getConfig

        org.apache.commons.configuration2.tree.ImmutableNode getConfig()
        Get the config for this filter
        Returns:
        The config