- ByteMapper
- CalculatedSimilar
- Correlation
- Data
- DataException
- DataType
- DoubleMapper
- EM
- FilterDefinition
- FormatDefinition
- InfoDefinition
- IntegerMapper
- InvalidGenotypeException
- Knni
- KnniLD
- KnniLDOpt
- KnniOpt
- LinkImpute
- Mapper
- Mask
- Meta
- Mode
- NotEnoughGenotypesException
- Optimize
- Pearson
- Phred
- PlinkNumeric
- PlinkPed
- Position
- Progress
- RepeatedSampleException
- RepeatedSNPException
- SampleSnp
- SilentProgress
- Similar
- SortByIndexDouble
- StoredSimilar
- StringMapper
- TextProgress
- TopQueue
- Value
- VCF
- WrongNumberOfSNPsException